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Message Boards Message batch renaming files already on Ranch
Hi all, I have several directories of files already on Ranch archival storage that I need to batch-rename in order to run them efficiently through some code. Some of my files have spaces in them,...
Message Boards Message Using Persistent Communication in Fortran MPI
Dear community; I attended the summer bootcamp on 2015. We discussed OpemMP, MPI and OpenACC. In the boot camp we solved the famous problem of laplace equation. However, I am working with a more...
mpi
Message Boards Message Jobs running abnormally slow on Comet
Recently, some jobs on Comet seem to be running a factor of 4 slower than usual (that is, they run slow from the start and throughout the entire calculation). I have cancelled such jobs and and...
Message Boards Message XSEDE user direct ssh to stampede2
Dear all, As an XSEDE user, can I directly ssh login to stampede2.tacc.utexas.edu without going through the login.xsede.org server? When I tried it, it asked for TACC token which I do not have. ...
Message Boards Message [CFP] Pycon Tutorials, Talks, & Posters
Have you dreamed of visiting Cleveland, Ohio? You should submit to PyCon's Call for proposals. Tutorial proposals — deadline is 24 November 2017 AoE. Talk, Poster, and Education Summit proposals...
python conference cfp
Message Boards Message XSEDE user direct ssh to stampede2
Dear all, As an XSEDE user, can I directly ssh login to stampede2.tacc.utexas.edu without going through the login.xsede.org server? When I tried it, it asked for TACC token which I do not have. ...
Message Boards Message Publicly accessible Swift storage?
I need to do some experimentation using the Swift API and it would be convenient if there was a "publicly" (i.e. XSEDE specific) Swift storage server available that I could use. Does such a thing...
Message Boards Message OpenSeesMP on Stampede2
Has anyone run OpenSeesMP or OpenSeesSP on Stampede2 or know how we can do this? I placed a copy of the .exe file in the folder from which I'm working on, and there are tcl libraries installed...
Message Boards Message question about setting nodes/threads with spark-submit and srun
I'm really new with both spark and srun. In both spark-submit and srun, there are options to set nodes and tasks. How should I write the settings so that the spark jobs are distributed on the nodes...
Message Boards Message DOE SBIR "HPC Cybersecurity" - collaborators? feedback? comments?
Dear HPC community, I would like to ask for your help. We are currently writing an HPC cybersecurity related proposal for the DOE SBIR (Dept. of Energy Small Business Innovation & Research)...
Message Boards Message module not found
Hello I upload python with the command [i]module load python3[/i], but when I run my program for example [i]pyhton3 filename.py[/i], it gives the following error [i]no module found matplotlib[/i]....
Message Boards Message Protein Sequence XSEDE Beginners Help
Hello Everyone, I am working on a bioinformatics research project related to a bacterial protein. I am planning on utilizing XSEDE resources in my research. Actually, I have watched some XSEDE...
Message Boards Message comet's gdal missing glibc dependency?
I'm trying to run gdaladdo on comet and getting a "GLIBC not found" error. I am using the gdal module but still getting this error. Is there a way for me to fix the error in my submission script?...
Message Boards Message Running ORCA on Expanse
Hello, I received a start-up allocation for expanse and have been trying to run geometry optimizations for a research project. I have previous experience from a class I took in my graduate program...
Message Boards Message Running ORCA on Expanse
Hello, I received a start-up allocation for expanse and have been trying to run geometry optimizations for a research project. I have previous experience from a class I took in my graduate program...
Message Boards Message Supplement Allocation
Hi, I have almost used 75% of my SU's for the startup allocations. I would need a supplement allocation. How many SU's I can ask for in the Supplement Allocation and what would be the procedure...
Message Boards Message Deciding between research and renewal allocations.
My group has a currently active allocation, on Trestles and Kraken, which has been working reasonably well for the first portion of our research project. We have found that the next stage of the...
Message Boards Message Renewal vs. Supplement
I currently have a startup allocation and a research allocation. The work has gone very well so far and I am very pleased with both the XSEDE setup and the help I have received through TACC, the...
Message Boards Message Increasing the walltime to more than 24 hours on nautilus
Is there a way to have a job execute for more than 24 hours on nautilus? I've had two longer-running jobs killed because they needed more time to complete. I'm writing out intermediate results now...
nautilus intermediate results long-running jobs
Message Boards Message Submitting request using portal and unable to save progress
Hello All, I'm trying to submit a startup proposal using the XSEDE allocation request system. But as I'm filling out the information I click "Save Progress", it will frequently and apparently...
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