Extended Collaborative Support Service (ECSS)
ECSS Projects
Here is a list of ECSS Projects broken up by: Research Teams, Community Codes, Scientific Gateways, and Past Project
Last Updated June 13, 2017
Research Teams
| Project Name | PI Name | PI Institution | Consultant Name | Allocation End |
|---|---|---|---|---|
| Decomposing Bodies | Alison Langmead | University of Pittsburgh | Craig, Alan,Puthanveetil, Sandeep,Rodriguez, Paul | 5/3/17 |
| Machine Assisted Rhetorical Analysis | James Ian Wynn | Carnegie Mellon University | Gomez, Roberto | 5/17/17 |
| Micromechanical analysis of stress-strain inhomoheneities with Fourier transforms (MASSIF) | Anthony D Rollett | Carnegie Mellon University | Jana, Anirban | 5/17/17 |
| DISSCO, a Digital Instrument for Sound Synthesis and Composition | Sever Tipei | University of Illinois at Urbana-Champaign | Rodriguez, Paul,Sinkovits, Bob | 6/13/17 |
| Computational Design and Molecular Dynamics Simulations of Protein, Polymers and Host-Guest Interact | Jeffery G Saven | University of Pennsylvania | Eijkhout, Victor | 6/30/17 |
| Computational fluid-structure interaction of biological systems, Y3 | Haoxiang Luo | Vanderbilt University | Liu, Hang | 6/30/17 |
| Constructing Nanosecond Level Snapshot of Financial Markets Using Supercomputers, y3 | Mao Ye | University of Illinois at Urbana-Champaign | Huang, Lei,O'Neal, David | 6/30/17 |
| DNS of droplet-laden isotropic turbulence, y4 | Antonino Ferrante | University of Washington | Adams, Darren | 6/30/17 |
| Image Analysis of the 1935-1944 Farm Security Administration - Office of War Information Photography | Elizabeth Wuerffel | Valparaiso University | Craig, Alan,Puthanveetil, Sandeep,Rodriguez, Paul | 6/30/17 |
| Multiscale Simulation and Complex Data Fitting of HIV Latency-Reactivation Control and Viral Dynamic | Alan Stuart Perelson | Los Alamos National Laboratory | Abeysinghe, Eroma,Carrington, Laura,Hoover, Paul | 6/30/17 |
| Numerical Modeling of High-Impact Weather: Severe Storms, Tornadoes and Winter Cyclones, Y4 | Brian F Jewett | University of Illinois at Urbana-Champaign | O'Neal, David | 6/30/17 |
| Simulation for 2D Semiconductor with Parallel Uniform and Adaptive Multigrid Method for Phase Field | Zhen Guan | University of California, Irvine | Bock, David,Pamidighantam, Sudhakar,Pekurovsky, Dmitry | 6/30/17 |
| Six Degrees of Francis Bacon | Christopher Norton Warren | Carnegie Mellon University | Gomez, Roberto,Walling, David | 6/30/17 |
| Digital Humanities Projects: Processing XML Data | Elisa Eileen Beshero-Bondar | University of Pittsburgh | 8/16/17 | |
| Computational studies of earthquake hazards: effects of complex geologic structure and topography on | Morgan Paul Moschetti | US Geological Survey | Cui, Yifeng,Koesterke, Lars | 9/30/17 |
| Large Scale Biomechanics Simulations in ABAQUS | Jonathan Pieter Vande Geest | University of Pittsburgh | Jana, Anirban | 10/9/17 |
| First-principles studis of electronic structure and transport in semiconductors and multifunctional | Xiaoguang Zhang | University of Florida | Wang, Yang | 11/1/17 |
| Distributed MCMC for Bayesian Hierarchical Models | Imran Currim | University of California, Irvine | Rodriguez, Paul,Zonca, Andrea | 11/3/17 |
| ARIEL: Analysis of Rare Incident-Event Languages | Ravi Starzl | Carnegie Mellon University | Simmel, Derek,Urbanic, John | 12/7/17 |
| Computational Studies on Physical and Chemical Properties | Yigui Wang | Southern Connecticut State University | Madrid, Marcela,Wang, Yang | 12/31/17 |
| Statistical Analysis for Partially-Observed Markov Processes with Marked Point Process Obs, Y4 | Yong Zeng | University of Missouri, Kansas City | Horton, Mitch | 12/31/17 |
| Structural Estimation of Equilibrium Models, Y3 | Chao Fu | University of Wisconsin-Madison | Carrington, Laura | 12/31/17 |
| Tuning Geodynamo Simulation to Paleomagnetic Observations, Y2 | David Gubbins | Scripps Institution of Oceanography | Burdyshaw, Chad,Su, Shiquan | 12/31/17 |
| Speeding-up Agent-Based Simulation of Cattle Herd Infection Diseases | Rebecca Lee Smith | National Center for Supercomputing Applications | Cui, Yifeng | 2/21/18 |
| Deep Learning for drug-protein interaction prediction | Gil Alterovitz | Harvard Medical School/Boston Children's Hospital | Wang, Yang | 3/26/18 |
| Multilingual FrameNet: Cross-lingual Alignment and Annotation | Collin F Baker | International Computer Science Institute | Gomez, Roberto | 3/26/18 |
| An implicit, Chimera-based discontinuous Galerkin solver: development and application | Paul David Orkwis | University of Cincinnati | Bock, David,Del Vento, Davide | 3/31/18 |
| Computation and testing of effective degree of eQTL Networks | Sheila Marie Gaynor | Harvard University | 5/16/18 | |
| Genome-Wide microRNAs and Single Gamete Based Genetic Profiling of Sweet Sorghum Varieties for Biofu | Ahmad Naseer Aziz | Tennessee State University | 5/16/18 |
Community Codes:
| Project Name | PI Name | PI Institution | Consultant Name | Allocation End |
|---|---|---|---|---|
| Adaptive Finite-element Simulations of Complex Industrial Flow Problems | Cameron Walter Smith | Rensselaer Polytechnic Institute | Huang, Lei | 6/30/17 |
| Direct Numerical Simulations and Analysis of Compressible And Incompressible Turbulence, Y3 | Diego Donzis | Texas A&M University | Patel, Pragnesh | 6/30/17 |
| Genome Assembly and Annotation of Red Abalone, Yellowtail, Soybean Cyst Nematode and Spiny Softshell | Andrew J Severin | Iowa State University | O'Neal, David | 6/30/17 |
| Omics approaches to understanding cellular and organismal responses to chronic stress in marine mamm | Jane Khudyakov | University of the Pacific | Ferlanti, Erik | 9/1/17 |
| Surface-induced forcing and decadal variability and change of the East Asian climate, surface hydrol | Yongkang Xue | University of California, Los Angeles | Su, Shiquan | 9/14/17 |
| Assessing future flood risk from the emerging threat of Madden-Julian Oscillation amplification usin | Gabe Kooperman | University of California, Irvine | Liu, Si | 9/30/17 |
| Computational Anatomy Gateway | Michael I Miller | Johns Hopkins University | Gomez, Antonio | 9/30/17 |
| Exploring the universe with Advanced LIGO's detections of compact-object binaries | Duncan Brown | Syracuse University | Koesterke, Lars,Pekurovsky, Dmitry | 9/30/17 |
| Predictability and Data Assimilation of Severe Weather and Tropical Cyclones, Y2 | Fuqing Zhang | Pennsylvania State University | Foss, Greg | 9/30/17 |
| Computational Support for Bioinformatics Projects on Assembly Analysis of Fungal Metagenomes for the | Suping Zhou | Tennessee State University | Ropelewski, Alex | 12/31/17 |
| Preparing for Checkpoint-Restart in the Exascale Generation, Y2 | Gene Cooperman | Northeastern University | Vienne, Jerome | 12/31/17 |
| Simulation of Quantum Circuits in the Clifford-T gate set | Antia Lamas-Linares | Texas Advanced Computing Center | Proctor, Cyrus | 2/9/18 |
| Using semantic networks to generate novel hypotheses in biomedicine | Jodi Schneider | University of Illinois at Urbana-Champaign | 3/1/18 | |
| Alpha-viscosity vs. GRMHD | Patrick C Fragile | College of Charleston | 3/31/18 | |
| Development of a High-Performance Parallel Gibbs Ensemble Monte Carlo Simulation Engine | Jeffrey J. Potoff | Wayne State University | 5/31/18 |
Scientific Gateways:
| Project Name | PI Name | PI Institution | Consultant Name | Allocation End |
|---|---|---|---|---|
| Providing a Science Gateway to Existing Simulations of Galaxy Cluster Mergers, Y2 | Marios Chatzikos | University of Kentucky | Thompson, Christopher | 6/12/17 |
| Simulation for the IceCube telescope data analysis and detector upgrade studies | Francis Halzen | University of Wisconsin-Madison | Rynge, Mats | 6/30/17 |
| High Resolution Spatial Temporal Analysis of Whole-Head 306-Channel Magnetoencephalography and 66-Ch | David Shannahoff-Khalsa | University of California, San Diego | Wong, Mona | 8/9/17 |
| dREG Science Gateway | Charles G Danko | Cornell University | Abeysinghe, Eroma | 8/14/17 |
| WaterHUB for Hydrologic Modeling and Education | Venkatesh Merwade | Purdue University | Zhao, Lan | 9/7/17 |
| DiaGrid: Deliverying Science-as-a-Service for Collaborative Research and Education Communities | Carol Xiaohui Song | Purdue University | Thompson, Christopher | 10/2/17 |
| Carnegie Library of Pittsburgh: Digital Asset Management | Brooke Sansosti | Carnegie Library of Pittsburgh | Gomez, Roberto | 10/18/17 |
| Data Investigation and Sharing Environment for Big Weather Web | Carlos Maltzahn | University of California, Santa Cruz | Marru, Suresh | 12/1/17 |
| Atmospheric Science in the Cloud: Enabling Data-Proximate Science | Mohan Ramamurthy | UCAR/Unidata | Marru, Suresh | 12/31/17 |
| Deploying Multi-Facility Cyberinfrastructure in XSEDE cloud and storage facilities to serve the nati | Timothy Keith Ahern | Incorporated Research Institutions for Seismology | Zonca, Andrea | 12/31/17 |
| Inter-cloud Bursting: Decreasing Time-to-Science with a Multi-Stack Cloud Federation | Adam M Brazier | Cornell University | Rynge, Mats | 12/31/17 |
| Modeling the Effective Energy and Mass Transfer input to Earth's Critical Zone from sub-meter to glo | Jon Damian Pelletier | University of Arizona | Liu, Yan,Rynge, Mats | 12/31/17 |
| NFIE Hydrological Property Computation at National Scale | Zong-Liang Yang | University of Texas at Austin | Liu, Yan | 1/17/18 |
| Particle-in-Cell and Kinetic Simulation Software Center (PICKSC) Gateway | Benjamin John Winjum | University of California, Los Angeles | 5/16/18 | |
| GISandbox: A Gateway for Research, Education, and Experimentation in Geographic Information Systems | Eric Shook | University of Minnesota | 6/4/18 |
Past projects
| Project Name | PI Name | PI Institution | AUSS Staff Assigned | End Date | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cyber-enabled investigations of turbulence: studies of mixing and dispersion | Pui-kuen Yeung | Zhao, Lan | 9/30/12 | ||||||||||
| Social Science Gateway | Lars Vilhuber | Uram, Tom | 1/25/13 | ||||||||||
| Coupling climate and hydrological models: interoperability through web services | Cecelia DeLuca | You, Haihang | 3/14/13 | ||||||||||
| Computational Studies of Complex Processes In Biological Macromolecular Systems | Benoit Roux | Pamidighantam, Sudhakar | 3/31/13 | ||||||||||
| Science Gateway for Systems Biology Workbench Portal | Bhanu Rekepalli | Gunathilake, Lahiru | 4/6/13 | ||||||||||
| Realizing the Universe on XSEDE: Simulation Support for the Dark Energy Survey | August Evrard | Singh, Raminder | 6/30/13 | ||||||||||
| Evaluation of Airavata with ADaM Toolkit | Manil Maskey | Gunathilake, Lahiru | 9/14/13 | ||||||||||
| Providing a Neuroscience Gateway | Amitava Majumdar | Schwartz, Terri | 11/10/13 | ||||||||||
| Terrain analysis using digital elevation models | David Tarboton | Fan, Ye, Liu, Yan | 11/15/13 | ||||||||||
| SCEC Petascale Research: An Earthquake System Science Approach to Physics-based Seismic Hazard Research | Thomas Jordan | University of Southern California | 12/31/13 | ||||||||||
| NCGAS Benchmarking and Initial Collaborations | Richard LeDuc | Ma, Yu (Marie), Marru, Suresh, Pierce, Marlon | 2/13/14 | ||||||||||
| Coupling Climate and Hydrological Models: Interoperability Through Web Services | Cecelia DeLuca | 3/14/14 | |||||||||||
| SPLINTER (Structural Protein-Ligand Interactome) | Robert Quick | Indiana University | Marru, Suresh, Singh, Raminder | 3/14/14 | |||||||||
| Einstein Genome Gateway | Joseph Hargitai | Albert Einstein College of Medicine | Pierce, Marlon | 3/30/14 | |||||||||
| High-Resolution Modeling of Hydrodynamic Experiments | Borries Demeler | University of Texas Health Science Center, San Antonio | Singh, Raminder | 3/31/14 | |||||||||
| Science and Engineering Applications Grid (SEAGRID): A Gateway for Simulation of Molecular and Material Structures and Dynamics | Sudhakar Pamidighantam | University of Illinois at Urbana-Champaign | Smith, Warren | 3/31/14 | |||||||||
| CESM portal: A gateway for integrated climate modeling, data analysis, archiving and metadata publishing | Matthew Huber | Purdue University | Marru, Suresh | 4/25/14 | |||||||||
| A RADICAL Use of XSEDE: Large-Scale Atomistic MD Simulations, Multi-Scale Climate Modeling and associated Cyberinfrastructure for XSEDE Resources | Shantenu Jha | Rutgers, the State University of New Jersey | 6/30/14 | ||||||||||
| The CIPRES Science Gateway: A Resource of Inference of Large Phylogenetic Trees | Mark Miller | University of California-San Diego | 6/30/14 | ||||||||||
| Identification of Mechanism Based Inhibitors of Oncogene Pathways Using High-Performance Docking | Yuri Peterson | Rekepalli, Bhanu | 6/30/13 | ||||||||||
| Mesoscale Airflow over Mountains: Wave Drag and Orographic Precipitation | Dale Durran | Crosby, Lonnie, Wozniak, Jo | 6/30/13 | ||||||||||
| Investigation of Flow and Transport in Porous Media | Dimitiros Papavassiliou | James, Doug, McLay, Robert, Rosales, Carlos | 6/30/13 | ||||||||||
| Science Gateway for Systems Biology Workbench Portal | Bhanu Rekepalli | Gunathilake, Lahiru | 4/6/13 | ||||||||||
| Realizing the Universe on XSEDE: Simulation Support for the Dark Energy Survey | August Evrard | Singh, Raminder | 6/30/13 | ||||||||||
