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  <title>comet's gdal missing glibc dependency?</title>
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  <subtitle>comet's gdal missing glibc dependency?</subtitle>
  <entry>
    <title>comet's gdal missing glibc dependency?</title>
    <link rel="alternate" href="https://conferences.xsede.org/c/message_boards/find_message?p_l_id=&amp;messageId=2521096" />
    <author>
      <name>Tylar Murray</name>
    </author>
    <id>https://conferences.xsede.org/c/message_boards/find_message?p_l_id=&amp;messageId=2521096</id>
    <updated>2020-07-25T20:54:12Z</updated>
    <published>2020-07-25T20:54:12Z</published>
    <summary type="html">I&amp;#039;m trying to run gdaladdo on comet and getting a &amp;#034;GLIBC not found&amp;#034; error.&lt;br /&gt;I am using the gdal module but still getting this error.&lt;br /&gt;&lt;br /&gt;Is there a way for me to fix the error in my submission script?&lt;br /&gt;I tried installing with yum but got a permissions error (not surprising).&lt;br /&gt;&lt;br /&gt;Here is my submission script:&lt;br /&gt;&lt;br /&gt;&lt;div class="code"&gt;&lt;span class="code-lines"&gt;&amp;nbsp;1&lt;/span&gt;#!/bin/bash&lt;br /&gt;&lt;span class="code-lines"&gt;&amp;nbsp;2&lt;/span&gt;#SBATCH --job-name =&amp;#034;wv_mosaic_gdal&amp;#034;&lt;br /&gt;&lt;span class="code-lines"&gt;&amp;nbsp;3&lt;/span&gt;#SBATCH --mem=1G&lt;br /&gt;&lt;span class="code-lines"&gt;&amp;nbsp;4&lt;/span&gt;#SBATCH --partition=large-shared&lt;br /&gt;&lt;span class="code-lines"&gt;&amp;nbsp;5&lt;/span&gt;#SBATCH --time=24:00:00&lt;br /&gt;&lt;span class="code-lines"&gt;&amp;nbsp;6&lt;/span&gt;&lt;br /&gt;&lt;span class="code-lines"&gt;&amp;nbsp;7&lt;/span&gt;module purge&lt;br /&gt;&lt;span class="code-lines"&gt;&amp;nbsp;8&lt;/span&gt;module load gdal&lt;br /&gt;&lt;span class="code-lines"&gt;&amp;nbsp;9&lt;/span&gt;&lt;br /&gt;&lt;span class="code-lines"&gt;10&lt;/span&gt;export GDAL_VRT_ENABLE_PYTHON=YES&lt;br /&gt;&lt;span class="code-lines"&gt;11&lt;/span&gt;export GDAL_VERT_ENABLE_PYTHON&lt;br /&gt;&lt;span class="code-lines"&gt;12&lt;/span&gt;&lt;br /&gt;&lt;span class="code-lines"&gt;13&lt;/span&gt;gdaladdo --config BIGTIFF_OVERIEW YES -ro CETX_overview.vrt 1&lt;br /&gt;&lt;/div&gt;&lt;br /&gt;&lt;br /&gt;and the full error:&lt;br /&gt;&lt;br /&gt;&lt;div class="code"&gt;&lt;span class="code-lines"&gt;1&lt;/span&gt;gdaladdo: /lib64/libstdc++.so.6: version `GLIBCXX_3.4.21&amp;#039; not found (required by gdaladdo)&lt;br /&gt;&lt;span class="code-lines"&gt;2&lt;/span&gt;gdaladdo: /lib64/libstdc++.so.6: version `CXXABI_1.3.8&amp;#039; not found (required by /opt/gdal/lib/libgdal.so.20)&lt;br /&gt;&lt;span class="code-lines"&gt;3&lt;/span&gt;gdaladdo: /lib64/libstdc++.so.6: version `GLIBCXX_3.4.21&amp;#039; not found (required by /opt/gdal/lib/libgdal.so.20)&lt;br /&gt;&lt;span class="code-lines"&gt;4&lt;/span&gt;gdaladdo: /lib64/libstdc++.so.6: version `GLIBCXX_3.4.20&amp;#039; not found (required by /opt/gdal/lib/libgdal.so.20)&lt;br /&gt;&lt;span class="code-lines"&gt;5&lt;/span&gt;gdaladdo: /lib64/libstdc++.so.6: version `CXXABI_1.3.9&amp;#039; not found (required by /opt/gdal/lib/libgdal.so.20)&lt;br /&gt;&lt;/div&gt;</summary>
    <dc:creator>Tylar Murray</dc:creator>
    <dc:date>2020-07-25T20:54:12Z</dc:date>
  </entry>
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