Cannot install python power point pptx parser on stampede
Cannot install python power point pptx parser on stampede
RE: Cannot install python power point pptx parser on stampede
Chris Hempel
https://conferences.xsede.org/c/message_boards/find_message?p_l_id=&messageId=1144050
2016-02-09T19:05:42Z
2016-02-09T19:05:42Z
Hello Victor,<br /><br />I submitted a support ticket (41157) on your behalf via the XSEDE ticket system. A member of the TACC HPC group will respond via the ticket and provide assistance.<br /><br />Thanks,<br />Chris<br /><br />Chris Hempel<br />Director of User Services<br />Texas Advanced Computing Center
Chris Hempel
2016-02-09T19:05:42Z
Cannot install python power point pptx parser on stampede
Victor Shum
https://conferences.xsede.org/c/message_boards/find_message?p_l_id=&messageId=1142409
2016-02-07T03:03:05Z
2016-02-07T03:03:05Z
Hi users on this forum, <br /><br />On installing python_pptx using the pip install command I was able to compile all the dependencies but could not write the lxml library due to write permission.<br /><br />Not sure if I can get around this problem ? Thanks ! Best, Victor<br /><br />Details of the installation log below: <br /><br />login3.stampede(42)$ pip install python-pptx<br />Collecting python-pptx<br /> Using cached python-pptx-0.5.8.tar.gz<br />Collecting lxml>=3.1.0 (from python-pptx)<br /> Using cached lxml-3.5.0.tar.gz<br />Collecting Pillow>=2.6.1 (from python-pptx)<br /> Using cached Pillow-3.1.1.tar.gz<br />Collecting XlsxWriter>=0.5.7 (from python-pptx)<br /> Using cached XlsxWriter-0.8.4-py2.py3-none-any.whl<br />Installing collected packages: lxml, Pillow, XlsxWriter, python-pptx<br /> Running setup.py install for lxml<br /> Complete output from command /opt/apps/intel15/python/2.7.9/bin/python -c "import setuptools, tokenize;__file__='/tmp/pip-build-gq5QCD/lxml/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /tmp/pip-ttZjZK-record/install-record.txt --single-version-externally-managed --compile:<br /> Building lxml version 3.5.0.<br /> Building without Cython.<br /> Using build configuration of libxslt 1.1.26<br /> Building against libxml2/libxslt in the following directory: /usr/lib64<br /> running install<br /> running build<br /> running build_py<br /> creating build<br /> creating build/lib.linux-x86_64-2.7<br /> creating build/lib.linux-x86_64-2.7/lxml<br /> copying src/lxml/doctestcompare.py -> build/lib.linux-x86_64-2.7/lxml<br /> copying src/lxml/builder.py -> build/lib.linux-x86_64-2.7/lxml<br /> copying src/lxml/__init__.py -> build/lib.linux-x86_64-2.7/lxml<br /> copying src/lxml/usedoctest.py -> build/lib.linux-x86_64-2.7/lxml<br /> copying src/lxml/ElementInclude.py -> build/lib.linux-x86_64-2.7/lxml<br /> copying src/lxml/pyclasslookup.py -> build/lib.linux-x86_64-2.7/lxml<br /> copying src/lxml/sax.py -> build/lib.linux-x86_64-2.7/lxml<br /> copying src/lxml/cssselect.py -> build/lib.linux-x86_64-2.7/lxml<br /> copying src/lxml/_elementpath.py -> build/lib.linux-x86_64-2.7/lxml<br /> creating build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/__init__.py -> build/lib.linux-x86_64-2.7/lxml/includes<br /> creating build/lib.linux-x86_64-2.7/lxml/html<br /> copying src/lxml/html/builder.py -> build/lib.linux-x86_64-2.7/lxml/html<br /> copying src/lxml/html/clean.py -> build/lib.linux-x86_64-2.7/lxml/html<br /> copying src/lxml/html/defs.py -> build/lib.linux-x86_64-2.7/lxml/html<br /> copying src/lxml/html/__init__.py -> build/lib.linux-x86_64-2.7/lxml/html<br /> copying src/lxml/html/ElementSoup.py -> build/lib.linux-x86_64-2.7/lxml/html<br /> copying src/lxml/html/usedoctest.py -> build/lib.linux-x86_64-2.7/lxml/html<br /> copying src/lxml/html/html5parser.py -> build/lib.linux-x86_64-2.7/lxml/html<br /> copying src/lxml/html/_diffcommand.py -> build/lib.linux-x86_64-2.7/lxml/html<br /> copying src/lxml/html/formfill.py -> build/lib.linux-x86_64-2.7/lxml/html<br /> copying src/lxml/html/diff.py -> build/lib.linux-x86_64-2.7/lxml/html<br /> copying src/lxml/html/soupparser.py -> build/lib.linux-x86_64-2.7/lxml/html<br /> copying src/lxml/html/_setmixin.py -> build/lib.linux-x86_64-2.7/lxml/html<br /> copying src/lxml/html/_html5builder.py -> build/lib.linux-x86_64-2.7/lxml/html<br /> creating build/lib.linux-x86_64-2.7/lxml/isoschematron<br /> copying src/lxml/isoschematron/__init__.py -> build/lib.linux-x86_64-2.7/lxml/isoschematron<br /> copying src/lxml/lxml.etree.h -> build/lib.linux-x86_64-2.7/lxml<br /> copying src/lxml/lxml.etree_api.h -> build/lib.linux-x86_64-2.7/lxml<br /> copying src/lxml/includes/xslt.pxd -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/xpath.pxd -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/schematron.pxd -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/uri.pxd -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/dtdvalid.pxd -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/tree.pxd -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/xmlerror.pxd -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/htmlparser.pxd -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/relaxng.pxd -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/xmlparser.pxd -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/config.pxd -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/xinclude.pxd -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/c14n.pxd -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/etreepublic.pxd -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/xmlschema.pxd -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/etree_defs.h -> build/lib.linux-x86_64-2.7/lxml/includes<br /> copying src/lxml/includes/lxml-version.h -> build/lib.linux-x86_64-2.7/lxml/includes<br /> creating build/lib.linux-x86_64-2.7/lxml/isoschematron/resources<br /> creating build/lib.linux-x86_64-2.7/lxml/isoschematron/resources/rng<br /> copying src/lxml/isoschematron/resources/rng/iso-schematron.rng -> build/lib.linux-x86_64-2.7/lxml/isoschematron/resources/rng<br /> creating build/lib.linux-x86_64-2.7/lxml/isoschematron/resources/xsl<br /> copying src/lxml/isoschematron/resources/xsl/XSD2Schtrn.xsl -> build/lib.linux-x86_64-2.7/lxml/isoschematron/resources/xsl<br /> copying src/lxml/isoschematron/resources/xsl/RNG2Schtrn.xsl -> build/lib.linux-x86_64-2.7/lxml/isoschematron/resources/xsl<br /> creating build/lib.linux-x86_64-2.7/lxml/isoschematron/resources/xsl/iso-schematron-xslt1<br /> copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_schematron_message.xsl -> build/lib.linux-x86_64-2.7/lxml/isoschematron/resources/xsl/iso-schematron-xslt1<br /> copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_abstract_expand.xsl -> build/lib.linux-x86_64-2.7/lxml/isoschematron/resources/xsl/iso-schematron-xslt1<br /> copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_dsdl_include.xsl -> build/lib.linux-x86_64-2.7/lxml/isoschematron/resources/xsl/iso-schematron-xslt1<br /> copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_schematron_skeleton_for_xslt1.xsl -> build/lib.linux-x86_64-2.7/lxml/isoschematron/resources/xsl/iso-schematron-xslt1<br /> copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_svrl_for_xslt1.xsl -> build/lib.linux-x86_64-2.7/lxml/isoschematron/resources/xsl/iso-schematron-xslt1<br /> copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/readme.txt -> build/lib.linux-x86_64-2.7/lxml/isoschematron/resources/xsl/iso-schematron-xslt1<br /> running build_ext<br /> building 'lxml.etree' extension<br /> creating build/temp.linux-x86_64-2.7<br /> creating build/temp.linux-x86_64-2.7/src<br /> creating build/temp.linux-x86_64-2.7/src/lxml<br /> icc -fno-strict-aliasing -ipo -fPIC -mkl -O3 -fp-model strict -fomit-frame-pointer -xhost -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -fPIC -I/usr/include/libxml2 -Isrc/lxml/includes -I/opt/apps/intel15/python/2.7.9/include/python2.7 -c src/lxml/lxml.etree.c -o build/temp.linux-x86_64-2.7/src/lxml/lxml.etree.o -w<br /> icc -shared -ipo -fp-model strict -fomit-frame-pointer -xhost -lpthread -mkl build/temp.linux-x86_64-2.7/src/lxml/lxml.etree.o -L/usr/lib64 -L/opt/apps/intel15/python/2.7.9/lib -lxslt -lexslt -lxml2 -lz -lm -lpython2.7 -o build/lib.linux-x86_64-2.7/lxml/etree.so<br /> building 'lxml.objectify' extension<br /> icc -fno-strict-aliasing -ipo -fPIC -mkl -O3 -fp-model strict -fomit-frame-pointer -xhost -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -fPIC -I/usr/include/libxml2 -Isrc/lxml/includes -I/opt/apps/intel15/python/2.7.9/include/python2.7 -c src/lxml/lxml.objectify.c -o build/temp.linux-x86_64-2.7/src/lxml/lxml.objectify.o -w<br /> icc -shared -ipo -fp-model strict -fomit-frame-pointer -xhost -lpthread -mkl build/temp.linux-x86_64-2.7/src/lxml/lxml.objectify.o -L/usr/lib64 -L/opt/apps/intel15/python/2.7.9/lib -lxslt -lexslt -lxml2 -lz -lm -lpython2.7 -o build/lib.linux-x86_64-2.7/lxml/objectify.so<br /> running install_lib<br /> creating /opt/apps/intel15/python/2.7.9/lib/python2.7/site-packages/lxml<br /> error: could not create '/opt/apps/intel15/python/2.7.9/lib/python2.7/site-packages/lxml': Permission denied
Victor Shum
2016-02-07T03:03:05Z