In coordination with the ACCESS team, XSEDE has paused the processing of Startup, Education, and other allocation requests from August 17-31. This pause will ensure that no requests are lost while we are making infrastructure updates behind the scenes and handing things over to ACCESS. If you have questions, contact help@xsede.org. The ACCESS team will resume taking allocation requests on September 1 via https://access-ci.org/.

The discussion forums in the XSEDE User Portal are for users to share experiences, questions, and comments with other users and XSEDE staff. Visitors are welcome to browse and search, but you must login to contribute to the forums. While XSEDE staff monitor the lists, XSEDE does not guarantee that questions will be answered. Please note that the forums are not a replacement for formal support or bug reporting procedures through the XSEDE Help Desk. You must be logged in to post to the user forums.

« Back

cut3d in Abinit

Combination View Flat View Tree View
Threads [ Previous | Next ]
cut3d in Abinit
Answer
7/15/14 5:05 PM
Hi,

I want to use cut3d in Abinit to analyze a non-formatted _DEN output file. Does anyone know how to properly call the cut3d utility program in a batch job for Blacklight?

Thanks,
Ellen

RE: cut3d in Abinit
Answer
12/4/14 4:03 PM as a reply to Marcela Madrid.
Hi Marcela,

I followed your instruction to write the script, but still failed. Below is my script, can you help me to see anything wrong?


module load abinit
export PBS_O_WORKDIR=$(readlink -f $PBS_O_WORKDIR)
cd $PBS_O_WORKDIR
aprun -n 24 cut3d < input.in

Thank you

Jiabo